base2Allele {MPR}R Documentation

~~function to do ... ~~

Description

~~ A concise (1-5 lines) description of what the function does. ~~

Usage

base2Allele(baseData = NULL)

Arguments

baseData ~~Describe baseData here~~

Details

~~ If necessary, more details than the description above ~~

Value

~Describe the value returned If it is a LIST, use

comp1 Description of 'comp1'
comp2 Description of 'comp2'

...

Warning

....

Note

~~further notes~~

~Make other sections like Warning with section{Warning }{....} ~

Author(s)

~~who you are~~

References

~put references to the literature/web site here ~

See Also

~~objects to See Also as help, ~~~

Examples

##---- Should be DIRECTLY executable !! ----
##-- ==>  Define data, use random,
##--    or do  help(data=index)  for the standard data sets.

## The function is currently defined as
function (baseData = NULL) 
{
    allele.matrix <- t(apply(baseData, 1, function(x) {
        x <- unique(x[!is.na(x)])
        if (length(x) == 2) 
            return(x)
        else warning("SNP sit is not biallelic!")
        c(NA, NA)
    }))
    colnames(allele.matrix) <- c("P1", "P2")
    allele.matrix
  }

[Package MPR version 0.1 Index]